BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032A04LP1|AL429496
(852 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1642 1672 0.0
>3x_Contig1642
Length = 16641
Score = 1672 bits (843), Expect = 0.0
Identities = 851/853 (99%), Gaps = 1/853 (0%)
Strand = Plus / Minus
Query: 1 gatcaactgctcgtattcactttgattgayaacaaaggccgcaatatctttcaaatgttg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2428 gatcaactgctcgtattcactttgattgacaacaaaggccgcaatatctttcaaatgttg 2369
Query: 61 aagagaacgcgggtcatctttcagcgatagaacaatatctttgagatgtttgctatggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2368 aagagaacgcgggtcatctttcagcgatagaacaatatctttgagatgtttgctatggct 2309
Query: 121 gtaaaataatagctctttagatttcaatgggtccttagtcttcaaaatttcaattttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2308 gtaaaataatagctctttagatttcaatgggtccttagtcttcaaaatttcaattttttt 2249
Query: 181 tccaaccgcactgagctgttttaataccttgcttcttgccattgcatctaggcccttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2248 tccaaccgcactgagctgttttaataccttgcttcttgccattgcatctaggcccttctc 2189
Query: 241 ctgctgttgtctcactaattggatcctattgtatgtcaataaggctatttgtttctttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2188 ctgctgttgtctcactaattggatcctattgtatgtcaataaggctatttgtttctttgt 2129
Query: 301 atcttgctgtagttgttggattttattgtgcttcgca-tacggacaagtgatctcaatag 359
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2128 atcttgctgtagttgttggattttattgtgcttcgcactacggacaagtgatctcaatag 2069
Query: 360 tgacttatatgtcgataacgttagctcactcattgtatgatccttaatatattctatatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2068 tgacttatatgtcgataacgttagctcactcattgtatgatccttaatatattctatatt 2009
Query: 420 atcactgctctgtgagataatgataagtggagatatcctataatgcctattataatatgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2008 atcactgctctgtgagataatgataagtggagatatcctataatgcctattataatatgt 1949
Query: 480 caaggcagagtactctcataacatgctagaatcaccaatctaatacagaactcatcgaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1948 caaggcagagtactctcataacatgctagaatcaccaatctaatacagaactcatcgaaa 1889
Query: 540 catttttcaacagtcaaatctctctttaactgtcgatccagatcacgtgaaacctttttc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1888 catttttcaacagtcaaatctctctttaactgtcgatccagatcacgtgaaacctttttc 1829
Query: 600 acgtttcttctgtaaatctgaagatatatttcattccgggtaatgattcgtgtttttttt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1828 acgtttcttctgtaaatctgaagatatatttcattccgggtaatgattcgtgtttttttt 1769
Query: 660 ttgtcacttttctttattttcctcttgttcgttttttgactgactcaatgccgagaacgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1768 ttgtcacttttctttattttcctcttgttcgttttttgactgactcaatgccgagaacgg 1709
Query: 720 aacccaggtcacatgatcgcgactgttattatactgcagcgggaccgactttccaacttg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1708 aacccaggtcacatgatcgcgactgttattatactgcagcgggaccgactttccaacttg 1649
Query: 780 aacacaggggaatcaaatgtgacctaaattttgttagaaattggcatgataagtatataa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1648 aacacaggggaatcaaatgtgacctaaattttgttagaaattggcatgataagtatataa 1589
Query: 840 atacaaaatatgg 852
|||||||||||||
Sbjct: 1588 atacaaaatatgg 1576
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8589
Number of Sequences: 1807
Number of extensions: 8589
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 852
length of database: 10,358,551
effective HSP length: 16
effective length of query: 836
effective length of database: 10,329,639
effective search space: 8635578204
effective search space used: 8635578204
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)